STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE78984.1PTS system, sucrose-specific IIC component. (479 aa)    
Predicted Functional Partners:
SHF08590.1
PTS system, sucrose-specific IIC component.
 
0.992
SHE89715.1
PTS system, D-glucosamine-specific IIC component.
 
0.989
SHE52976.1
PTS system IIA component, Glc family (TC 4.A.1).
 0.988
SHE89515.1
PTS system, glucose-specific IIA component.
 0.988
SHE92282.1
PTS system, beta-glucosides-specific IIC component.
 
0.981
SHF16351.1
PTS system, beta-glucosides-specific IIC component.
 
0.980
SHE62482.1
Transcriptional regulator, MarR family.
  
 0.967
SHE37223.1
Phosphocarrier protein.
  
 
 0.959
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
 0.916
SHF08626.1
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.898
Your Current Organism:
Atopostipes suicloacalis
NCBI taxonomy Id: 1121025
Other names: A. suicloacalis DSM 15692, Atopostipes suicloacalis DSM 15692
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.