STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE82485.1ATP-binding cassette, subfamily B. (582 aa)    
Predicted Functional Partners:
SHE82459.1
ATP-binding cassette, subfamily C.
 
 
0.913
SHF04297.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 
     
0.899
SHE31650.1
Putative ABC transport system ATP-binding protein.
 
     
0.883
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.875
SHE27355.1
Glycine betaine/proline transport system ATP-binding protein.
 
     
0.703
ecfA-2
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.675
SHE98260.1
ATP-binding cassette, subfamily B, multidrug efflux pump.
  
 
0.613
SHE95275.1
ATP-binding cassette, subfamily B.
 
 
0.611
SHE52848.1
ATP-binding cassette, subfamily B.
  
 
0.608
SHF16075.1
ATP-binding cassette, subfamily B.
  
 
0.608
Your Current Organism:
Atopostipes suicloacalis
NCBI taxonomy Id: 1121025
Other names: A. suicloacalis DSM 15692, Atopostipes suicloacalis DSM 15692
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