STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE86798.1Zinc-ribbon domain-containing protein. (288 aa)    
Predicted Functional Partners:
SHE86834.1
Uncharacterized membrane protein YvbJ.
 
  
 0.886
SHE86762.1
Zinc-ribbon domain-containing protein.
      
0.773
SHE71446.1
Protein of unknown function.
  
 
 0.636
SHE48931.1
Maltodextrin utilization protein YvdJ.
  
     0.485
SHE74447.1
Uncharacterized NAD(P)/FAD-binding protein YdhS.
  
     0.484
SHE88702.1
Nuclease-related domain-containing protein.
  
     0.484
SHE86874.1
Zinc-ribbon domain-containing protein.
  
  
 0.481
SHE39256.1
Uncharacterized membrane protein YesL.
  
     0.479
SHE63647.1
Nuclease-related domain-containing protein.
  
     0.475
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.475
Your Current Organism:
Atopostipes suicloacalis
NCBI taxonomy Id: 1121025
Other names: A. suicloacalis DSM 15692, Atopostipes suicloacalis DSM 15692
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