STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE92431.1Transcriptional regulator, LacI family. (344 aa)    
Predicted Functional Partners:
SHE89715.1
PTS system, D-glucosamine-specific IIC component.
    
 0.802
SHE92282.1
PTS system, beta-glucosides-specific IIC component.
    
 0.802
SHF08590.1
PTS system, sucrose-specific IIC component.
    
 0.802
SHF16351.1
PTS system, beta-glucosides-specific IIC component.
    
 0.802
SHE92466.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
  
 0.648
SHF15587.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.638
SHE37223.1
Phosphocarrier protein.
   
 
 0.633
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
   0.554
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.536
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.527
Your Current Organism:
Atopostipes suicloacalis
NCBI taxonomy Id: 1121025
Other names: A. suicloacalis DSM 15692, Atopostipes suicloacalis DSM 15692
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.