STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE94482.1Conserved domain-containing protein. (315 aa)    
Predicted Functional Partners:
SHE50901.1
Fatty-acid peroxygenase; Belongs to the cytochrome P450 family.
  
    0.728
SHE93102.1
Conserved TM helix.
  
    0.572
SHE97263.1
Hypothetical protein.
  
     0.541
SHF18591.1
Hypothetical protein.
  
     0.541
SHE32731.1
Uncharacterized NAD(P)/FAD-binding protein YdhS.
  
     0.531
corA
Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
   
    0.513
SHF16188.1
Hypothetical protein.
  
    0.513
SHE33999.1
Osmoprotectant transport system permease protein.
  
    0.501
SHF01679.1
Osmoprotectant transport system substrate-binding protein.
  
    0.498
SHE94517.1
Fructose-bisphosphate aldolase, class II.
       0.477
Your Current Organism:
Atopostipes suicloacalis
NCBI taxonomy Id: 1121025
Other names: A. suicloacalis DSM 15692, Atopostipes suicloacalis DSM 15692
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