Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHF16834.1 | SHF16873.1 | SAMN02745249_01949 | SAMN02745249_01950 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Holin-like protein. | 0.598 |
SHF16834.1 | SHF16902.1 | SAMN02745249_01949 | SAMN02745249_01951 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | TIGR00659 family protein. | 0.577 |
SHF16834.1 | SHF16946.1 | SAMN02745249_01949 | SAMN02745249_01952 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Lactate oxidase. | 0.552 |
SHF16873.1 | SHF16834.1 | SAMN02745249_01950 | SAMN02745249_01949 | Holin-like protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.598 |
SHF16873.1 | SHF16902.1 | SAMN02745249_01950 | SAMN02745249_01951 | Holin-like protein. | TIGR00659 family protein. | 0.991 |
SHF16873.1 | SHF16946.1 | SAMN02745249_01950 | SAMN02745249_01952 | Holin-like protein. | Lactate oxidase. | 0.669 |
SHF16902.1 | SHF16834.1 | SAMN02745249_01951 | SAMN02745249_01949 | TIGR00659 family protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.577 |
SHF16902.1 | SHF16873.1 | SAMN02745249_01951 | SAMN02745249_01950 | TIGR00659 family protein. | Holin-like protein. | 0.991 |
SHF16902.1 | SHF16946.1 | SAMN02745249_01951 | SAMN02745249_01952 | TIGR00659 family protein. | Lactate oxidase. | 0.688 |
SHF16946.1 | SHF16834.1 | SAMN02745249_01952 | SAMN02745249_01949 | Lactate oxidase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.552 |
SHF16946.1 | SHF16873.1 | SAMN02745249_01952 | SAMN02745249_01950 | Lactate oxidase. | Holin-like protein. | 0.669 |
SHF16946.1 | SHF16902.1 | SAMN02745249_01952 | SAMN02745249_01951 | Lactate oxidase. | TIGR00659 family protein. | 0.688 |