STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429625_01279Unannotated protein. (292 aa)    
Predicted Functional Partners:
GCA_000429625_02149
Unannotated protein.
 
  
 0.932
GCA_000429625_00053
Unannotated protein.
 
  
 0.864
GCA_000429625_00052
Unannotated protein.
 
  
 0.860
GCA_000429625_05619
Unannotated protein.
    
 0.838
GCA_000429625_00609
Unannotated protein.
    
  0.831
GCA_000429625_05370
Unannotated protein.
    
  0.831
GCA_000429625_00069
Unannotated protein.
 
     0.802
GCA_000429625_05172
Unannotated protein.
 
    0.774
GCA_000429625_02211
Unannotated protein.
   
   0.687
GCA_000429625_04732
Unannotated protein.
   
   0.687
Your Current Organism:
Azospirillum halopraeferens
NCBI taxonomy Id: 1121033
Other names: A. halopraeferens DSM 3675, Azospirillum halopraeferens DSM 3675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.