STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_00138Unannotated protein. (351 aa)    
Predicted Functional Partners:
GCA_000429645_04715
Unannotated protein.
 
 
 0.991
GCA_000429645_00668
Unannotated protein.
   
 
 0.983
GCA_000429645_00462
Unannotated protein.
  
 
 0.942
GCA_000429645_00667
Unannotated protein.
    
 0.873
GCA_000429645_00867
Unannotated protein.
   
  
 0.824
GCA_000429645_03748
Unannotated protein.
   
    0.799
GCA_000429645_00154
Unannotated protein.
  
  
 0.790
GCA_000429645_00797
Unannotated protein.
   
  
 0.758
GCA_000429645_00137
Unannotated protein.
  
 0.751
GCA_000429645_01529
Unannotated protein.
   
    0.749
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.