STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_00289Unannotated protein. (172 aa)    
Predicted Functional Partners:
GCA_000429645_00288
Unannotated protein.
 
 0.999
GCA_000429645_03013
Unannotated protein.
    
 0.921
GCA_000429645_01127
Unannotated protein.
     
 0.897
GCA_000429645_03011
Unannotated protein.
  
 
 0.894
GCA_000429645_01311
Unannotated protein.
    
 0.893
GCA_000429645_01372
Unannotated protein.
  
 
 0.892
GCA_000429645_01312
Unannotated protein.
    
 0.891
GCA_000429645_02341
Unannotated protein.
    
 0.873
GCA_000429645_00308
Unannotated protein.
    
 0.868
GCA_000429645_02257
Unannotated protein.
   
 
 0.868
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.