STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_01074Unannotated protein. (202 aa)    
Predicted Functional Partners:
GCA_000429645_01073
Unannotated protein.
 
     0.691
GCA_000429645_03095
Unannotated protein.
    
 0.560
GCA_000429645_01075
Unannotated protein.
     
 0.553
GCA_000429645_03097
Unannotated protein.
     
 0.548
GCA_000429645_01072
Unannotated protein.
   
   0.543
GCA_000429645_01076
Unannotated protein.
       0.538
GCA_000429645_01077
Unannotated protein.
       0.538
GCA_000429645_03089
Unannotated protein.
  
 
 0.493
GCA_000429645_03094
Unannotated protein.
    
 0.468
GCA_000429645_01672
Unannotated protein.
  
    0.446
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
Server load: low (24%) [HD]