STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_02120Unannotated protein. (469 aa)    
Predicted Functional Partners:
GCA_000429645_01279
Unannotated protein.
   
 0.991
GCA_000429645_01666
Unannotated protein.
 
  
 0.923
GCA_000429645_00889
Unannotated protein.
     
 0.848
GCA_000429645_01665
Unannotated protein.
    
 0.697
GCA_000429645_02966
Unannotated protein.
 
  
 0.566
GCA_000429645_02121
Unannotated protein.
       0.461
GCA_000429645_02187
Unannotated protein.
 
  
 0.452
GCA_000429645_01687
Unannotated protein.
    
 0.438
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.