STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_02406Unannotated protein. (106 aa)    
Predicted Functional Partners:
GCA_000429645_02405
Unannotated protein.
 
     0.822
GCA_000429645_03907
Unannotated protein.
 
   
 0.725
GCA_000429645_02402
Unannotated protein.
 
  
 0.704
GCA_000429645_02398
Unannotated protein.
 
     0.695
GCA_000429645_02404
Unannotated protein.
 
     0.692
GCA_000429645_01429
Unannotated protein.
  
  
 0.669
GCA_000429645_01710
Unannotated protein.
  
  
 0.669
GCA_000429645_03494
Unannotated protein.
  
  
 0.669
GCA_000429645_03914
Unannotated protein.
  
  
 0.669
GCA_000429645_02400
Unannotated protein.
 
     0.630
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.