STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_03596Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_000429645_03595
Unannotated protein.
 
     0.946
GCA_000429645_03095
Unannotated protein.
   
 0.914
GCA_000429645_03094
Unannotated protein.
 
 
 0.873
GCA_000429645_03097
Unannotated protein.
   
 0.865
GCA_000429645_03594
Unannotated protein.
 
 
 0.834
GCA_000429645_03204
Unannotated protein.
 
 
 0.777
GCA_000429645_03593
Unannotated protein.
       0.773
GCA_000429645_03597
Unannotated protein.
       0.773
GCA_000429645_03209
Unannotated protein.
  
     0.768
GCA_000429645_03210
Unannotated protein.
 
 
 0.759
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.