STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_03679Unannotated protein. (268 aa)    
Predicted Functional Partners:
GCA_000429645_03217
Unannotated protein.
  
 
 0.937
GCA_000429645_03871
Unannotated protein.
 
  
 0.887
GCA_000429645_03880
Unannotated protein.
  
  
 0.722
GCA_000429645_03681
Unannotated protein.
 
    0.674
GCA_000429645_03680
Unannotated protein.
 
     0.672
GCA_000429645_03872
Unannotated protein.
 
 
 0.660
GCA_000429645_00946
Unannotated protein.
    
 0.659
GCA_000429645_02980
Unannotated protein.
 
    0.637
GCA_000429645_04077
Unannotated protein.
 
    0.612
GCA_000429645_03743
Unannotated protein.
 
    0.601
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.