STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_04103Unannotated protein. (1019 aa)    
Predicted Functional Partners:
GCA_000429645_04102
Unannotated protein.
 0.994
GCA_000429645_04628
Unannotated protein.
 0.977
GCA_000429645_02516
Unannotated protein.
 
 0.964
GCA_000429645_00099
Unannotated protein.
 0.951
GCA_000429645_04101
Unannotated protein.
 
 0.948
GCA_000429645_02410
Unannotated protein.
 0.944
GCA_000429645_02171
Unannotated protein.
 0.929
GCA_000429645_02456
Unannotated protein.
 0.929
GCA_000429645_02029
Unannotated protein.
 
 0.922
GCA_000429645_03933
Unannotated protein.
 
 0.917
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.