STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429645_04140Unannotated protein. (1556 aa)    
Predicted Functional Partners:
GCA_000429645_03835
Unannotated protein.
 
 0.971
GCA_000429645_03837
Unannotated protein.
 
0.959
GCA_000429645_03836
Unannotated protein.
 
0.955
GCA_000429645_04162
Unannotated protein.
  
  0.915
GCA_000429645_03429
Unannotated protein.
 
  
  0.896
GCA_000429645_01758
Unannotated protein.
  
 
 0.893
GCA_000429645_01759
Unannotated protein.
  
 
 0.893
GCA_000429645_02486
Unannotated protein.
  
 
 0.887
GCA_000429645_02226
Unannotated protein.
 
  
  0.862
GCA_000429645_02048
Unannotated protein.
 
  
 0.842
Your Current Organism:
Niveispirillum irakense
NCBI taxonomy Id: 1121034
Other names: Azospirillum irakense DSM 11586, N. irakense DSM 11586, Niveispirillum irakense DSM 11586, Niveispirillum irakense KBC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.