STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429705_01384Unannotated protein. (414 aa)    
Predicted Functional Partners:
GCA_000429705_00469
Unannotated protein.
 
   
 0.819
GCA_000429705_00470
Unannotated protein.
 
   
 0.814
GCA_000429705_03230
Unannotated protein.
  
   
 0.807
GCA_000429705_01355
Unannotated protein.
  
   
 0.798
GCA_000429705_03189
Unannotated protein.
  
  
 0.793
GCA_000429705_00595
Unannotated protein.
  
    0.777
GCA_000429705_00449
Unannotated protein.
  
     0.772
GCA_000429705_00594
Unannotated protein.
  
     0.771
GCA_000429705_03889
Unannotated protein.
  
     0.769
GCA_000429705_00597
Unannotated protein.
  
     0.767
Your Current Organism:
Bacillus aurantiacus
NCBI taxonomy Id: 1121086
Other names: B. aurantiacus DSM 18675, Bacillus aurantiacus DSM 18675, Bacillus aurantiacus K1-5, Bacillus sp. K1-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.