STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374565_02265Unannotated protein. (390 aa)    
Predicted Functional Partners:
GCA_000374565_00750
Unannotated protein.
 
   
 0.547
GCA_000374565_00761
Unannotated protein.
  
     0.463
GCA_000374565_00751
Unannotated protein.
 
     0.458
GCA_000374565_00743
Unannotated protein.
 
     0.431
GCA_000374565_01888
Unannotated protein.
 
     0.431
GCA_000374565_04217
Unannotated protein.
 
     0.431
GCA_000374565_04358
Unannotated protein.
 
     0.431
Your Current Organism:
Bacillus fordii
NCBI taxonomy Id: 1121090
Other names: B. fordii DSM 16014 = CIP 108821, Bacillus fordii CIP 108821, Bacillus fordii CIP 108821 = DSM 16014, Bacillus fordii DSM 16014, Bacillus fordii DSM 16014 = CIP 108821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.