STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374565_03361Unannotated protein. (239 aa)    
Predicted Functional Partners:
GCA_000374565_03362
Unannotated protein.
     0.981
GCA_000374565_03369
Unannotated protein.
   
 0.839
GCA_000374565_01263
Unannotated protein.
  
 0.735
GCA_000374565_00147
Unannotated protein.
  
 0.707
GCA_000374565_03889
Unannotated protein.
  
 0.531
GCA_000374565_03360
Unannotated protein.
       0.516
GCA_000374565_01881
Unannotated protein.
    
 0.474
GCA_000374565_02432
Unannotated protein.
  
 0.455
GCA_000374565_03359
Unannotated protein.
  
    0.446
GCA_000374565_02434
Unannotated protein.
  
 
 0.438
Your Current Organism:
Bacillus fordii
NCBI taxonomy Id: 1121090
Other names: B. fordii DSM 16014 = CIP 108821, Bacillus fordii CIP 108821, Bacillus fordii CIP 108821 = DSM 16014, Bacillus fordii DSM 16014, Bacillus fordii DSM 16014 = CIP 108821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.