STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430785_00223Unannotated protein. (469 aa)    
Predicted Functional Partners:
GCA_000430785_00222
Unannotated protein.
 
    0.814
GCA_000430785_00469
Unannotated protein.
   
 
  0.755
GCA_000430785_00221
Unannotated protein.
  
    0.734
GCA_000430785_00916
Unannotated protein.
  
 
  0.730
GCA_000430785_03484
Unannotated protein.
  
 
  0.730
GCA_000430785_03835
Unannotated protein.
  
 
  0.730
GCA_000430785_02332
Unannotated protein.
   
 
 0.729
GCA_000430785_00473
Unannotated protein.
    
  0.696
GCA_000430785_02777
Unannotated protein.
   
    0.626
GCA_000430785_03182
Unannotated protein.
   
  
 0.517
Your Current Organism:
Bacillus panaciterrae
NCBI taxonomy Id: 1121093
Other names: B. panaciterrae DSM 19096, Bacillus panaciterrae DSM 19096
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.