STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374585_01990Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_000374585_00171
Unannotated protein.
    
 0.696
GCA_000374585_01991
Unannotated protein.
       0.687
GCA_000374585_01992
Unannotated protein.
  
    0.523
GCA_000374585_02313
Unannotated protein.
    
  0.461
Your Current Organism:
Bacteroides barnesiae
NCBI taxonomy Id: 1121094
Other names: B. barnesiae DSM 18169 = JCM 13652, Bacteroides barnesiae DSM 18169, Bacteroides barnesiae DSM 18169 = JCM 13652, Bacteroides barnesiae JCM 13652, Bacteroides barnesiae JCM 13652 = DSM 18169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.