STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374585_02384Unannotated protein. (166 aa)    
Predicted Functional Partners:
GCA_000374585_02382
Unannotated protein.
       0.670
GCA_000374585_02383
Unannotated protein.
       0.670
GCA_000374585_00049
Unannotated protein.
  
 
 0.467
GCA_000374585_00735
Unannotated protein.
  
 
 0.467
GCA_000374585_02352
Unannotated protein.
    
  0.466
GCA_000374585_01162
Unannotated protein.
 
    0.453
GCA_000374585_02381
Unannotated protein.
       0.419
Your Current Organism:
Bacteroides barnesiae
NCBI taxonomy Id: 1121094
Other names: B. barnesiae DSM 18169 = JCM 13652, Bacteroides barnesiae DSM 18169, Bacteroides barnesiae DSM 18169 = JCM 13652, Bacteroides barnesiae JCM 13652, Bacteroides barnesiae JCM 13652 = DSM 18169
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.