STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374365_00415Unannotated protein. (423 aa)    
Predicted Functional Partners:
GCA_000374365_00414
Unannotated protein.
 
 
 0.933
GCA_000374365_00416
Unannotated protein.
 
 
 0.872
GCA_000374365_01777
Unannotated protein.
 
 
 0.861
GCA_000374365_00417
Unannotated protein.
 
 0.801
GCA_000374365_02577
Unannotated protein.
  
 
 0.761
GCA_000374365_02602
Unannotated protein.
 
 
 0.737
GCA_000374365_02328
Unannotated protein.
 
 
 0.733
GCA_000374365_02326
Unannotated protein.
 
  
  0.707
GCA_000374365_01175
Unannotated protein.
 
 0.641
GCA_000374365_01277
Unannotated protein.
 
 0.632
Your Current Organism:
Bacteroides gallinarum
NCBI taxonomy Id: 1121096
Other names: B. gallinarum DSM 18171 = JCM 13658, Bacteroides gallinarum DSM 18171, Bacteroides gallinarum DSM 18171 = JCM 13658, Bacteroides gallinarum JCM 13658, Bacteroides gallinarum JCM 13658 = DSM 18171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.