STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374365_00773Unannotated protein. (210 aa)    
Predicted Functional Partners:
GCA_000374365_02081
Unannotated protein.
    
 0.910
GCA_000374365_03467
Unannotated protein.
     
 0.897
GCA_000374365_02632
Unannotated protein.
   
 
 0.889
GCA_000374365_00761
Unannotated protein.
   
 0.698
GCA_000374365_03009
Unannotated protein.
  
  
  0.683
GCA_000374365_00774
Unannotated protein.
  
    0.656
GCA_000374365_03257
Unannotated protein.
    
  0.609
GCA_000374365_03490
Unannotated protein.
    
  0.605
GCA_000374365_03875
Unannotated protein.
  
 
 0.587
GCA_000374365_02165
Unannotated protein.
    
 0.579
Your Current Organism:
Bacteroides gallinarum
NCBI taxonomy Id: 1121096
Other names: B. gallinarum DSM 18171 = JCM 13658, Bacteroides gallinarum DSM 18171, Bacteroides gallinarum DSM 18171 = JCM 13658, Bacteroides gallinarum JCM 13658, Bacteroides gallinarum JCM 13658 = DSM 18171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.