STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374365_01964Unannotated protein. (176 aa)    
Predicted Functional Partners:
GCA_000374365_01965
Unannotated protein.
 
     0.921
GCA_000374365_01552
Unannotated protein.
 
     0.716
GCA_000374365_00199
Unannotated protein.
 
     0.714
GCA_000374365_00200
Unannotated protein.
 
     0.703
GCA_000374365_03438
Unannotated protein.
  
     0.549
GCA_000374365_01962
Unannotated protein.
       0.533
GCA_000374365_01963
Unannotated protein.
       0.533
GCA_000374365_03983
Unannotated protein.
  
     0.525
GCA_000374365_03199
Unannotated protein.
  
     0.520
GCA_000374365_03194
Unannotated protein.
  
     0.507
Your Current Organism:
Bacteroides gallinarum
NCBI taxonomy Id: 1121096
Other names: B. gallinarum DSM 18171 = JCM 13658, Bacteroides gallinarum DSM 18171, Bacteroides gallinarum DSM 18171 = JCM 13658, Bacteroides gallinarum JCM 13658, Bacteroides gallinarum JCM 13658 = DSM 18171
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.