STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JCM15093_596Unannotated protein. (247 aa)    
Predicted Functional Partners:
JCM15093_593
Unannotated protein.
 
     0.872
JCM15093_25
Unannotated protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.787
JCM15093_2282
Unannotated protein.
  
     0.772
JCM15093_2159
Unannotated protein.
  
     0.762
JCM15093_3387
Unannotated protein.
  
     0.752
JCM15093_594
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.750
JCM15093_1453
Unannotated protein.
  
     0.748
JCM15093_1417
Unannotated protein.
  
     0.744
JCM15093_1556
Unannotated protein.
  
     0.740
JCM15093_1221
Unannotated protein.
  
     0.730
Your Current Organism:
Bacteroides graminisolvens
NCBI taxonomy Id: 1121097
Other names: B. graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens DSM 19988, Bacteroides graminisolvens DSM 19988 = JCM 15093, Bacteroides graminisolvens JCM 15093, Bacteroides graminisolvens JCM 15093 = DSM 19988
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.