STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOA57649.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
EOA57650.1
Hypothetical protein.
  
    0.798
EOA53589.1
SufS family cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.673
EOA57656.1
Hypothetical protein.
 
     0.632
EOA56858.1
Hypothetical protein.
  
     0.554
EOA57651.1
Hypothetical protein.
  
    0.538
EOA53549.1
Hypothetical protein.
  
     0.528
EOA53247.1
Hypothetical protein.
  
     0.519
EOA55026.1
Hypothetical protein.
 
     0.471
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.459
EOA57978.1
Hypothetical protein.
  
     0.454
Your Current Organism:
Bacteroides massiliensis
NCBI taxonomy Id: 1121098
Other names: B. massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223, Bacteroides massiliensis B84634, Bacteroides massiliensis B84634 = DSM 17679, Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223, Bacteroides massiliensis DSM 17679, Bacteroides massiliensis JCM 13223, Bacteroides massiliensis str. Timone 84634, bacterium 84634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.