STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOA52338.1ABC-type bacteriocin transporter. (722 aa)    
Predicted Functional Partners:
EOA52339.1
Hypothetical protein.
 
 0.987
EOA53190.1
Hypothetical protein.
 
 0.916
EOA52337.1
Hypothetical protein.
  
  
 0.789
EOA58682.1
Hypothetical protein.
 
 
0.775
EOA55036.1
Hypothetical protein.
 
 
0.769
EOA53515.1
Hypothetical protein.
 
 
0.762
EOA53514.1
Hypothetical protein.
 
 
0.759
EOA55034.1
Hypothetical protein.
   
 0.732
EOA52401.1
Hypothetical protein.
  
 0.728
EOA58686.1
Hypothetical protein.
  
 0.725
Your Current Organism:
Bacteroides massiliensis
NCBI taxonomy Id: 1121098
Other names: B. massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223, Bacteroides massiliensis B84634, Bacteroides massiliensis B84634 = DSM 17679, Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223, Bacteroides massiliensis DSM 17679, Bacteroides massiliensis JCM 13223, Bacteroides massiliensis str. Timone 84634, bacterium 84634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.