STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIW15_02150Unannotated protein. (564 aa)    
Predicted Functional Partners:
DIW15_02140
Unannotated protein.
 
     0.905
GCA_000421665_01517
Unannotated protein.
    
0.903
GCA_000421665_01455
Unannotated protein.
 
     
0.894
GCA_000421665_00629
Unannotated protein.
 
     
0.884
DIW15_02145
Unannotated protein.
 
 
 
0.874
GCA_000421665_00421
Unannotated protein.
 
     
0.855
GCA_000421665_00964
Unannotated protein.
 
     
0.834
GCA_000421665_00042
Unannotated protein.
 
    
0.832
DIW15_02365
Unannotated protein.
  
  0.806
DIW15_02155
Unannotated protein.
       0.773
Your Current Organism:
Bavariicoccus seileri
NCBI taxonomy Id: 1121105
Other names: B. seileri DSM 19936, Bavariicoccus seileri DSM 19936
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.