STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frrUnannotated protein; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. (184 aa)    
Predicted Functional Partners:
pyrH
Unannotated protein; Catalyzes the reversible phosphorylation of UMP to UDP.
  
 0.998
rpsB
Unannotated protein; Belongs to the universal ribosomal protein uS2 family.
 
 
 0.998
GCA_000421665_00929
Unannotated protein.
 
 
 0.994
GCA_000421665_00953
Unannotated protein.
  
 
 0.994
rplT
Unannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
 
 
 0.994
rpsO
Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
 
 
 0.992
GCA_000421665_00935
Unannotated protein.
 
 
 0.992
GCA_000421665_00960
Unannotated protein.
  
 
 0.992
GCA_000421665_01563
Unannotated protein.
  
 
 0.992
GCA_000421665_00928
Unannotated protein.
  
 
 0.991
Your Current Organism:
Bavariicoccus seileri
NCBI taxonomy Id: 1121105
Other names: B. seileri DSM 19936, Bavariicoccus seileri DSM 19936
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.