STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421665_01464Unannotated protein. (241 aa)    
Predicted Functional Partners:
GCA_000421665_01465
Unannotated protein.
       0.796
recJ
Unannotated protein.
     
 0.710
DIW15_05245
Unannotated protein.
  
    0.602
GCA_000421665_01786
Unannotated protein.
 
  
 0.600
GCA_000421665_01966
Unannotated protein.
 
  
 0.569
DIW15_03620
Unannotated protein.
    
 0.515
GCA_000421665_01482
Unannotated protein.
 
   
 0.515
GCA_000421665_01940
Unannotated protein.
 
   
 0.509
GCA_000421665_01466
Unannotated protein.
       0.496
GCA_000421665_00829
Unannotated protein.
  
  
 0.482
Your Current Organism:
Bavariicoccus seileri
NCBI taxonomy Id: 1121105
Other names: B. seileri DSM 19936, Bavariicoccus seileri DSM 19936
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.