STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421665_01467Unannotated protein. (424 aa)    
Predicted Functional Partners:
GCA_000421665_01771
Unannotated protein.
  
 
 0.940
GCA_000421665_00936
Unannotated protein.
  
 
 0.937
GCA_000421665_01569
Unannotated protein.
   
 
 0.928
GCA_000421665_01562
Unannotated protein.
   
 
 0.923
GCA_000421665_01570
Unannotated protein.
   
 
 0.917
GCA_000421665_01466
Unannotated protein.
  
  
 0.902
GCA_000421665_01468
Unannotated protein.
  
  
 0.889
pnp
Unannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
   
  
 0.871
rpoZ
Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
 0.862
GCA_000421665_00820
Unannotated protein.
  
  
 0.807
Your Current Organism:
Bavariicoccus seileri
NCBI taxonomy Id: 1121105
Other names: B. seileri DSM 19936, Bavariicoccus seileri DSM 19936
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.