STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428765_01180Unannotated protein. (365 aa)    
Predicted Functional Partners:
GCA_000428765_01179
Unannotated protein.
 
 0.999
GCA_000428765_00639
Unannotated protein.
 
 0.993
GCA_000428765_02190
Unannotated protein.
 
 0.990
GCA_000428765_01641
Unannotated protein.
 
  
 0.983
GCA_000428765_01790
Unannotated protein.
    
 0.946
GCA_000428765_00715
Unannotated protein.
 
 
 0.898
GCA_000428765_01791
Unannotated protein.
 
 
 0.677
GCA_000428765_01374
Unannotated protein.
 
  
 0.651
GCA_000428765_01376
Unannotated protein.
  
  
 0.642
GCA_000428765_02476
Unannotated protein.
  
    0.635
Your Current Organism:
Brevundimonas aveniformis
NCBI taxonomy Id: 1121123
Other names: B. aveniformis DSM 17977, Brevundimonas aveniformis DSM 17977
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.