STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428765_01844Unannotated protein. (250 aa)    
Predicted Functional Partners:
GCA_000428765_01452
Unannotated protein.
   
 0.941
GCA_000428765_01451
Unannotated protein.
    
 0.824
GCA_000428765_01846
Unannotated protein.
 
     0.817
GCA_000428765_01845
Unannotated protein.
  
    0.790
GCA_000428765_01847
Unannotated protein.
       0.790
GCA_000428765_00222
Unannotated protein.
  
  
 0.660
GCA_000428765_02530
Unannotated protein.
 
 0.660
GCA_000428765_02582
Unannotated protein.
  
     0.631
GCA_000428765_01848
Unannotated protein.
       0.610
GCA_000428765_01082
Unannotated protein.
  
     0.604
Your Current Organism:
Brevundimonas aveniformis
NCBI taxonomy Id: 1121123
Other names: B. aveniformis DSM 17977, Brevundimonas aveniformis DSM 17977
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.