STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428765_02418Unannotated protein. (973 aa)    
Predicted Functional Partners:
GCA_000428765_02420
Unannotated protein.
       0.823
GCA_000428765_02419
Unannotated protein.
       0.821
GCA_000428765_02421
Unannotated protein.
  
    0.750
GCA_000428765_00812
Unannotated protein.
 
   
 0.725
GCA_000428765_01871
Unannotated protein.
 
   
 0.686
GCA_000428765_01596
Unannotated protein.
      0.649
GCA_000428765_02417
Unannotated protein.
       0.628
GCA_000428765_01063
Unannotated protein.
     
 0.606
GCA_000428765_00580
Unannotated protein.
     
 0.587
GCA_000428765_02416
Unannotated protein.
       0.577
Your Current Organism:
Brevundimonas aveniformis
NCBI taxonomy Id: 1121123
Other names: B. aveniformis DSM 17977, Brevundimonas aveniformis DSM 17977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.