STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428765_02594Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000428765_02091
Unannotated protein.
  
     0.740
GCA_000428765_02593
Unannotated protein.
       0.727
GCA_000428765_00019
Unannotated protein.
  
     0.726
GCA_000428765_02300
Unannotated protein.
  
    0.653
GCA_000428765_01682
Unannotated protein.
  
     0.608
GCA_000428765_02595
Unannotated protein.
       0.555
GCA_000428765_01912
Unannotated protein.
  
     0.509
GCA_000428765_01882
Unannotated protein.
  
     0.504
GCA_000428765_01834
Unannotated protein.
  
     0.489
GCA_000428765_01663
Unannotated protein.
  
     0.487
Your Current Organism:
Brevundimonas aveniformis
NCBI taxonomy Id: 1121123
Other names: B. aveniformis DSM 17977, Brevundimonas aveniformis DSM 17977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.