STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DWW18_10015Unannotated protein. (256 aa)    
Predicted Functional Partners:
DWW18_10010
Unannotated protein.
 
 0.999
DWW18_13690
Unannotated protein.
 
 0.991
DWW18_15855
Unannotated protein.
   
  0.981
DWW18_10020
Unannotated protein.
       0.751
DWW18_10025
Unannotated protein.
       0.709
DWW18_10030
Unannotated protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
       0.636
DWW18_18275
Unannotated protein.
 
    0.609
DWW18_10005
Unannotated protein.
       0.548
nuoA
Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
    0.518
rpsE
Unannotated protein; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.508
Your Current Organism:
Butyricimonas virosa
NCBI taxonomy Id: 1121130
Other names: B. virosa DSM 23226, Butyricimonas virosa DSM 23226
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.