STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DWW18_00490Unannotated protein. (233 aa)    
Predicted Functional Partners:
DWW18_00700
Unannotated protein.
   
 0.889
rplF
Unannotated protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.804
DWW18_12145
Unannotated protein.
    
 
 0.782
DWW18_17960
Unannotated protein.
    
 
 0.675
DWW18_15220
Unannotated protein; Belongs to the group II decarboxylase family.
    
 0.666
DWW18_13745
Unannotated protein.
  
 
   0.649
DWW18_03160
Unannotated protein.
  
 
 0.621
mraY
Unannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.616
DWW18_12170
Unannotated protein; Belongs to the V-ATPase 116 kDa subunit family.
    
 
 0.606
uppP
Unannotated protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
 
 0.587
Your Current Organism:
Butyricimonas virosa
NCBI taxonomy Id: 1121130
Other names: B. virosa DSM 23226, Butyricimonas virosa DSM 23226
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.