STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DWW18_13780Unannotated protein. (598 aa)    
Predicted Functional Partners:
DWW18_13775
Unannotated protein.
  
    0.762
DWW18_13785
Unannotated protein.
       0.704
DWW18_04850
Unannotated protein.
  
     0.576
DWW18_09140
Unannotated protein.
  
     0.507
DWW18_14320
Unannotated protein.
  
     0.493
DWW18_09960
Unannotated protein.
  
     0.465
DWW18_11405
Unannotated protein.
  
     0.446
recF
Unannotated protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
  
    0.432
DWW18_04610
Unannotated protein.
  
    0.411
Your Current Organism:
Butyricimonas virosa
NCBI taxonomy Id: 1121130
Other names: B. virosa DSM 23226, Butyricimonas virosa DSM 23226
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.