STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DWW18_05975Unannotated protein. (391 aa)    
Predicted Functional Partners:
DWW18_16760
Unannotated protein.
    
 0.853
rfbB
Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
    
 0.809
DWW18_14760
Unannotated protein.
  
  
 0.768
glmM
Unannotated protein.
 
 
 0.683
DWW18_19515
Unannotated protein.
  
 
 0.637
glmS
Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
  
 0.632
murA
Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
 
 0.630
DWW18_05115
Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.594
DWW18_10265
Unannotated protein; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
 
 0.593
DWW18_11155
Unannotated protein.
  
 
 0.588
Your Current Organism:
Butyricimonas virosa
NCBI taxonomy Id: 1121130
Other names: B. virosa DSM 23226, Butyricimonas virosa DSM 23226
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.