STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI12719.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
SHI28458.1
Flagellar hook-associated protein 2.
  
    0.832
SHI85129.1
Hypothetical protein.
  
     0.771
SHI29316.1
PEGA domain-containing protein.
  
     0.766
SHI25876.1
SCP-2 sterol transfer family protein.
  
     0.765
SHI11286.1
Hypothetical protein.
  
     0.759
SHI20453.1
Rod binding protein.
 
     0.759
SHI15454.1
Flagellar protein FliO/FliZ.
  
     0.758
SHH68230.1
Hypothetical protein.
  
     0.756
SHH83510.1
Protein of unknown function.
  
     0.755
SHI15602.1
Flagellar FliJ protein.
  
     0.754
Your Current Organism:
Butyrivibrio fibrisolvens DSM 3071
NCBI taxonomy Id: 1121131
Other names: B. fibrisolvens DSM 3071
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.