STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI20147.1Polar amino acid transport system ATP-binding protein. (251 aa)    
Predicted Functional Partners:
SHI20153.1
Polar amino acid transport system permease protein.
 0.993
SHI20161.1
Polar amino acid transport system permease protein.
 
 0.984
SHJ01379.1
Polar amino acid transport system substrate-binding protein.
 0.982
SHI75276.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 0.981
SHH88232.1
Polar amino acid transport system permease protein.
 0.979
SHI21937.1
Putative glutamine transport system permease protein.
 
 0.959
SHI75454.1
Polar amino acid transport system permease protein.
 0.956
SHI21945.1
Putative glutamine transport system permease protein.
 0.943
SHI23438.1
Polar amino acid transport system permease protein.
 0.929
SHI20169.1
Polar amino acid transport system substrate-binding protein.
 
 0.928
Your Current Organism:
Butyrivibrio fibrisolvens DSM 3071
NCBI taxonomy Id: 1121131
Other names: B. fibrisolvens DSM 3071
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.