STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ84253.1Central glycolytic genes regulator. (363 aa)    
Predicted Functional Partners:
SHJ84226.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.925
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
  
 0.777
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
  
 0.765
SHJ84281.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
     0.714
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
  
 0.675
SHK20907.1
Citrate lyase beta subunit.
  
 
  0.599
SHK51507.1
Uncharacterized protein Veg.
  
     0.578
SHK15620.1
Dihydroxyacetone kinase DhaK subunit.
    
  0.561
SHK15647.1
Dihydroxyacetone kinase DhaL subunit.
    
  0.561
SHK23746.1
Purine operon repressor, PurR.
  
   
 0.501
Your Current Organism:
Caminicella sporogenes
NCBI taxonomy Id: 1121266
Other names: C. sporogenes DSM 14501, Caminicella sporogenes DSM 14501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.