STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ88277.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
SHJ88234.1
Hypothetical protein.
       0.861
SHJ88257.1
Phage protein, HK97 gp10 family.
       0.861
SHJ88302.1
Phage gp6-like head-tail connector protein.
       0.861
SHJ88208.1
Phage tail tube protein, TTP.
       0.831
SHJ88183.1
Hypothetical protein.
       0.727
SHJ88351.1
Hypothetical protein.
       0.694
SHJ88142.1
Phage-related protein.
       0.666
SHJ88117.1
Hypothetical protein.
       0.655
SHJ88167.1
Hypothetical protein.
       0.654
SHJ88070.1
Hypothetical protein.
       0.624
Your Current Organism:
Caminicella sporogenes
NCBI taxonomy Id: 1121266
Other names: C. sporogenes DSM 14501, Caminicella sporogenes DSM 14501
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.