STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ96715.1Glycosyltransferase, GT2 family. (361 aa)    
Predicted Functional Partners:
SHJ68595.1
Flagellar motor switch protein FliN/FliY.
    
   0.868
SHK12022.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.792
SHK12049.1
Glycosyltransferase, GT2 family.
 
 
 0.786
SHK49339.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.779
SHK16805.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
  
0.710
SHJ96684.1
Hypothetical protein.
       0.705
SHK55666.1
AraC-type DNA-binding protein.
  
  
 0.670
SHK11945.1
Tetratricopeptide repeat-containing protein.
  
  
 0.625
SHJ96742.1
Hypothetical protein.
       0.601
SHK49099.1
UDP-glucose pyrophosphorylase.
    
 0.569
Your Current Organism:
Caminicella sporogenes
NCBI taxonomy Id: 1121266
Other names: C. sporogenes DSM 14501, Caminicella sporogenes DSM 14501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.