STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK12000.1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.960
galT
UTP-hexose-1-phosphate uridylyltransferase.
  
 
 0.956
SHJ96438.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.951
SHK12022.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.817
SHK49099.1
UDP-glucose pyrophosphorylase.
  
 0.802
SHK12097.1
UDPglucose 6-dehydrogenase.
 
 
 0.777
SHK11973.1
Hypothetical protein.
       0.773
SHK12049.1
Glycosyltransferase, GT2 family.
 
   
 0.708
SHJ82732.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
    
 0.631
SHJ81910.1
Glycosyl transferase family 2.
 
   
 0.588
Your Current Organism:
Caminicella sporogenes
NCBI taxonomy Id: 1121266
Other names: C. sporogenes DSM 14501, Caminicella sporogenes DSM 14501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.