STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK43925.1Uncharacterized membrane protein. (281 aa)    
Predicted Functional Partners:
SHJ97733.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.595
SHK43964.1
Iron complex transport system ATP-binding protein.
  
    0.478
SHK44005.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.476
SHK44026.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
       0.474
Your Current Organism:
Caminicella sporogenes
NCBI taxonomy Id: 1121266
Other names: C. sporogenes DSM 14501, Caminicella sporogenes DSM 14501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.