STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK48740.1Predicted protein. (941 aa)    
Predicted Functional Partners:
SHK48715.1
tRNA(Ile)-lysidine synthase TilS/MesJ; Belongs to the TtcA family.
       0.779
SHJ95070.1
Two-component signal transduction system YycFG, regulatory protein YycH.
  
     0.727
SHJ99636.1
N-acetylmuramoyl-L-alanine amidase.
  
  
  0.726
SHK19233.1
Hypothetical protein.
 
     0.721
SHJ90506.1
Universal stress protein family protein.
  
     0.712
SHK10442.1
S-layer homology domain-containing protein.
  
     0.694
SHK19020.1
Hypothetical protein.
  
     0.689
SHJ95105.1
YycH protein.
  
     0.676
SHK10241.1
S-layer homology domain-containing protein.
  
     0.675
SHK10256.1
S-layer homology domain-containing protein.
  
     0.650
Your Current Organism:
Caminicella sporogenes
NCBI taxonomy Id: 1121266
Other names: C. sporogenes DSM 14501, Caminicella sporogenes DSM 14501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.