STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429765_01198Unannotated protein. (335 aa)    
Predicted Functional Partners:
GCA_000429765_01287
Unannotated protein.
  
  0.976
GCA_000429765_01199
Unannotated protein.
 
  
  0.944
GCA_000429765_01894
Unannotated protein.
  
 0.900
GCA_000429765_01893
Unannotated protein.
  
 0.876
GCA_000429765_01045
Unannotated protein.
 
     0.803
GCA_000429765_01100
Unannotated protein.
 
  
  0.783
GCA_000429765_01196
Unannotated protein.
 
     0.774
GCA_000429765_01195
Unannotated protein.
 
     0.769
GCA_000429765_02782
Unannotated protein.
    
  0.747
GCA_000429765_01202
Unannotated protein.
 
     0.687
Your Current Organism:
Gemmobacter nectariphilus
NCBI taxonomy Id: 1121271
Other names: Catellibacterium nectariphilum DSM 15620, G. nectariphilus DSM 15620, Gemmobacter nectariphilus AST4, Gemmobacter nectariphilus DSM 15620, Gemmobacter nectariphilus NBRC 100046
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.