STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429765_01365Unannotated protein. (183 aa)    
Predicted Functional Partners:
GCA_000429765_01366
Unannotated protein.
 
   
 0.898
GCA_000429765_01368
Unannotated protein.
 
   
 0.867
GCA_000429765_01367
Unannotated protein.
 
   
 0.845
GCA_000429765_02188
Unannotated protein.
 
   
 0.743
GCA_000429765_00453
Unannotated protein.
      
 0.586
GCA_000429765_02743
Unannotated protein.
      
 0.586
GCA_000429765_01958
Unannotated protein.
 
     0.531
GCA_000429765_00235
Unannotated protein.
      
 0.430
GCA_000429765_03157
Unannotated protein.
      
 0.430
GCA_000429765_00261
Unannotated protein.
      
 0.414
Your Current Organism:
Gemmobacter nectariphilus
NCBI taxonomy Id: 1121271
Other names: Catellibacterium nectariphilum DSM 15620, G. nectariphilus DSM 15620, Gemmobacter nectariphilus AST4, Gemmobacter nectariphilus DSM 15620, Gemmobacter nectariphilus NBRC 100046
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.